RSA-tools - seq-proba

Calculate the probability of a sequence, given a background model.
Bernoulli or Markov models are supported.
Sequences must be composed of A,C,G,T (IUPAC code for ambiguous nucleotides is not supported)


Sequence       Format Paste your sequence in the box below

Or select a file to upload (.gz compressed files supported)


Mask 

Background model

RSAT pre-calculated background models

Custom background model


Pseudo-frequencies


Return fields 
 id    proba_b    log_proba    len    seq    detail  


Output