RSA-tools - genome-scale dna-pattern

Search a pattern (string description) within all upstream or downstream regions

Sequence retrieval options

Organism 
Feature type 
Sequence type From    To 
 allow overlap with upstream ORFs
Sequence label 

Pattern matching options

Query pattern(s)

Search strands    prevent overlapping matches
Return match positions flanking residues Origin Format
match counts threshold on match counts
match count table

Substitutions  
Output 
Warning ! genome-scale searches can be time-consuming. If you don't obtain any result after 5 minutes, we recommend email output.